STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT12792Signal peptidase complex subunit 3. (179 aa)    
Predicted Functional Partners:
KP79_PYT20192
Signal peptidase complex subunit 2.
   
 0.992
KP79_PYT21511
Signal peptidase complex subunit 1.
   
 0.991
KP79_PYT22618
Signal peptidase complex catalytic subunit SEC11.
   
 0.990
KP79_PYT06702
Translocation protein SEC63-like.
    
 
 0.762
KP79_PYT04865
Integrin-alpha FG-GAP repeat-containing protein 2.
   
 0.757
KP79_PYT23873
Mitochondrial inner membrane protease subunit 1.
   
 0.757
KP79_PYT14580
Mitochondrial inner membrane protease subunit 2.
   
 0.757
KP79_PYT18236
DNA repair protein XRCC4.
   
 0.757
KP79_PYT23475
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]
   
 0.610
KP79_PYT00464
Signal recognition particle 19 kDa protein.
   
  
 0.581
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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