STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT16122E1A-binding protein p400. (3176 aa)    
Predicted Functional Partners:
KP79_PYT12091
RuvB-like helicase; Belongs to the RuvB family.
    
 0.930
KP79_PYT03821
Actin-related protein 5.
    
 0.930
KP79_PYT03197
INO80 complex subunit B.
   
 0.917
KP79_PYT12323
Nuclear factor related to kappa-B-binding protein.
   
 0.856
KP79_PYT19388
INO80 complex subunit C.
    
 0.843
KP79_PYT01373
RuvB-like helicase; Belongs to the RuvB family.
   
 0.835
KP79_PYT11442
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
 0.800
KP79_PYT24415
Microspherule protein 1.
    
 0.790
KP79_PYT04925
INO80 complex subunit D.
    
 0.790
KP79_PYT18339
Actin-like protein 6B; Belongs to the actin family.
   
 0.790
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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