STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT18874Myomodulin neuropeptide. (338 aa)    
Predicted Functional Partners:
KP79_PYT14915
SURP and G-patch domain-containing protein 1.
   
 0.718
KP79_PYT06469
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.693
KP79_PYT17620
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 0.643
KP79_PYT10585
RNA-binding protein 25.
   
 
 0.618
KP79_PYT08811
Polypyrimidine tract-binding protein 3.
    
 0.614
KP79_PYT14418
RNA-binding protein 39.
   
 0.571
KP79_PYT20614
General transcription factor IIF subunit 2.
   
 
 0.568
KP79_PYT11262
G patch domain and KOW motifs-containing protein.
   
 
 0.567
KP79_PYT15548
Nucleolar protein 6.
    
 
 0.557
KP79_PYT14593
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
   
 0.556
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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