STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT01349PDZ and LIM domain protein 3. (541 aa)    
Predicted Functional Partners:
KP79_PYT08604
Focal adhesion kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.673
KP79_PYT10245
Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences.
   
 0.580
KP79_PYT18587
Vinculin.
   
 0.556
KP79_PYT13635
Catenin alpha.
   
 0.556
KP79_PYT24127
Alpha-catulin.
   
 0.556
KP79_PYT23167
Mesoderm development candidate 1.
    
 0.552
KP79_PYT18273
Adapter molecule Crk.
    
 0.543
KP79_PYT16348
ARF GTPase-activating protein GIT1.
    
 
 0.541
KP79_PYT14043
Salivary glue protein Sgs-4.
   
 0.473
KP79_PYT15118
Tropomyosin; Belongs to the tropomyosin family.
   
 0.460
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.