STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT08366R3H domain-containing protein 4. (291 aa)    
Predicted Functional Partners:
KP79_PYT13362
NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6.
   
 
 0.778
KP79_PYT14377
WD repeat-containing protein.
   
 
 0.778
KP79_PYT25949
7-dehydrocholesterol reductase.
   
 
 0.658
KP79_PYT10655
Lamin-B receptor.
   
 
 0.658
KP79_PYT08745
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
   
 
 0.598
KP79_PYT12676
Fatty acid hydroxylase domain-containing protein 2; Belongs to the sterol desaturase family.
   
 0.580
KP79_PYT22482
Lathosterol oxidase; Belongs to the sterol desaturase family.
   
 0.580
KP79_PYT04157
C-5 sterol desaturase erg32; Belongs to the sterol desaturase family.
   
 0.580
KP79_PYT08469
Cholesterol 25-hydroxylase-like protein; Belongs to the sterol desaturase family.
   
 0.580
KP79_PYT15065
Cholesterol 25-hydroxylase-like protein 1, member 2; Belongs to the sterol desaturase family.
   
 0.580
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.