STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT04667N-chimaerin. (521 aa)    
Predicted Functional Partners:
KP79_PYT11479
Ras-like GTP-binding protein RHO.
    
 0.669
KP79_PYT06101
Ras-related C3 botulinum toxin substrate 1.
    
 0.562
KP79_PYT20863
Ras-related C3 botulinum toxin substrate 1.
    
 0.562
KP79_PYT21648
Cdc42-like.
    
 0.562
KP79_PYT09539
Rho-related GTP-binding protein RhoU.
    
 0.562
KP79_PYT19828
Rho GTPase-activating protein 12.
    
0.535
KP79_PYT16069
Active breakpoint cluster region-related protein.
   
0.530
KP79_PYT10386
Rho-related GTP-binding protein RhoQ.
    
 0.520
KP79_PYT20791
Cytoplasmic protein NCK2.
    
 0.471
KP79_PYT02283
V-type proton ATPase subunit E.
 
      0.432
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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