STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT01133Protein ERGIC-53. (626 aa)    
Predicted Functional Partners:
KP79_PYT09579
Multiple coagulation factor deficiency protein 2-like.
   
 0.992
KP79_PYT10223
Multiple coagulation factor deficiency protein 2-like.
   
 0.930
KP79_PYT10391
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 
 0.874
KP79_PYT06155
Protein transport protein Sec31A.
   
 
 0.843
KP79_PYT04077
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
   
 0.831
KP79_PYT15894
RNA methyltransferase-like protein 1.
   
 0.828
KP79_PYT23512
Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
     
 0.825
KP79_PYT04078
Protein transport protein sec16.
     
 0.823
KP79_PYT11199
Protein SEC13-like; Belongs to the WD repeat SEC13 family.
   
 
 0.802
KP79_PYT06755
Circularly permutated Ras protein 1.
   
 
 0.775
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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