STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT2397028S ribosomal protein S28, mitochondrial. (209 aa)    
Predicted Functional Partners:
KP79_PYT14670
28S ribosomal protein S16, mitochondrial.
   
  0.989
KP79_PYT21591
28S ribosomal protein S22, mitochondrial.
   
  0.985
KP79_PYT16209
28S ribosomal protein S23, mitochondrial.
   
  0.980
KP79_PYT15140
28S ribosomal protein S29, mitochondrial.
   
  0.979
KP79_PYT15423
28S ribosomal protein S27, mitochondrial.
   
  0.979
KP79_PYT01968
28S ribosomal protein S15, mitochondrial.
   
  0.979
KP79_PYT14635
30S ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
   
  0.978
KP79_PYT06821
28S ribosomal protein S9, mitochondrial.
   
  0.978
KP79_PYT22338
28S ribosomal protein S31, mitochondrial.
   
  0.977
KP79_PYT07133
28S ribosomal protein S6, mitochondrial.
   
  0.975
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.