STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT009443-hydroxyacyl-CoA dehydrogenase type-2; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (258 aa)    
Predicted Functional Partners:
KP79_PYT05629
Enoyl-CoA hydratase, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.990
KP79_PYT10200
Mitochondrial ribonuclease P protein 3.
    
 0.967
KP79_PYT18508
3-ketoacyl-CoA thiolase, mitochondrial; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.962
KP79_PYT09010
Trifunctional enzyme subunit beta, mitochondrial; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.957
KP79_PYT19645
3-ketoacyl-CoA thiolase B, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.952
KP79_PYT19842
Peroxisomal bifunctional enzyme; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.946
KP79_PYT05736
Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial.
   
 
 0.945
KP79_PYT11491
Mitochondrial ribonuclease P protein 1-like.
    
 0.935
KP79_PYT11138
Mitochondrial ribonuclease P protein 1.
    
 0.935
KP79_PYT10656
Cytoplasmic dynein 1 heavy chain 1.
 
      0.896
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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