STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT23512Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (214 aa)    
Predicted Functional Partners:
KP79_PYT18383
BET1-like.
   
 0.999
KP79_PYT09893
Syntaxin-5.
   
 0.999
KP79_PYT04077
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
    
 0.998
KP79_PYT15739
Golgi SNAP receptor complex member 1.
   
 0.997
KP79_PYT17902
BET1-like protein.
   
 0.996
KP79_PYT18937
Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.996
KP79_PYT17788
Synaptobrevin-like YKT6.
   
 0.994
KP79_PYT05427
General vesicular transport factor p115.
    
 0.991
KP79_PYT21512
Uncharacterized protein.
   
 0.968
KP79_PYT10225
Vesicle-trafficking protein SEC22a; Belongs to the synaptobrevin family.
    
 0.961
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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