STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT20708G2/M phase-specific E3 ubiquitin-protein ligase. (306 aa)    
Predicted Functional Partners:
KP79_PYT06295
Set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.649
KP79_PYT22093
Retinoblastoma-binding protein 5.
    
 0.622
KP79_PYT07684
M-phase phosphoprotein 8.
    
 0.567
KP79_PYT05184
Polycomb protein Suz12.
   
 0.553
KP79_PYT09158
Uncharacterized protein.
    
 0.517
KP79_PYT24779
Polycomb protein eed-A.
   
 0.494
KP79_PYT07118
Polycomb protein EED.
   
 0.494
KP79_PYT20164
Lysine-specific demethylase 6A.
   
 0.469
KP79_PYT10879
Histone acetyltransferase KAT2B.
    
 0.438
KP79_PYT20724
WD repeat-containing protein 73.
   
 0.431
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.