Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KP79_PYT00333 | KP79_PYT04718 | A0A210R041 | A0A210PLR3 | U3 small nucleolar RNA-associated protein 18-like. | WD repeat-containing protein 46. | 0.998 |
KP79_PYT00333 | KP79_PYT05734 | A0A210R041 | A0A210QM62 | U3 small nucleolar RNA-associated protein 18-like. | Ribosome biogenesis protein BMS1-like. | 0.998 |
KP79_PYT00333 | KP79_PYT06750 | A0A210R041 | A0A210QND0 | U3 small nucleolar RNA-associated protein 18-like. | U3 small nucleolar RNA-associated protein 14-like B. | 0.998 |
KP79_PYT00333 | KP79_PYT09237 | A0A210R041 | A0A210PWI1 | U3 small nucleolar RNA-associated protein 18-like. | Something about silencing protein 10. | 0.998 |
KP79_PYT00333 | KP79_PYT15363 | A0A210R041 | A0A210QZ54 | U3 small nucleolar RNA-associated protein 18-like. | U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. | 0.997 |
KP79_PYT00333 | KP79_PYT17033 | A0A210R041 | A0A210R1U8 | U3 small nucleolar RNA-associated protein 18-like. | Nucleolar protein 14. | 0.998 |
KP79_PYT00333 | KP79_PYT18160 | A0A210R041 | A0A210QPS7 | U3 small nucleolar RNA-associated protein 18-like. | Protein AATF. | 0.993 |
KP79_PYT00333 | KP79_PYT18405 | A0A210R041 | A0A210PG45 | U3 small nucleolar RNA-associated protein 18-like. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
KP79_PYT00333 | KP79_PYT18744 | A0A210R041 | A0A210Q3L6 | U3 small nucleolar RNA-associated protein 18-like. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.991 |
KP79_PYT00333 | KP79_PYT23575 | A0A210R041 | A0A210PHJ3 | U3 small nucleolar RNA-associated protein 18-like. | DDB1-and CUL4-associated factor 13. | 0.990 |
KP79_PYT04718 | KP79_PYT00333 | A0A210PLR3 | A0A210R041 | WD repeat-containing protein 46. | U3 small nucleolar RNA-associated protein 18-like. | 0.998 |
KP79_PYT04718 | KP79_PYT05734 | A0A210PLR3 | A0A210QM62 | WD repeat-containing protein 46. | Ribosome biogenesis protein BMS1-like. | 0.998 |
KP79_PYT04718 | KP79_PYT06750 | A0A210PLR3 | A0A210QND0 | WD repeat-containing protein 46. | U3 small nucleolar RNA-associated protein 14-like B. | 0.998 |
KP79_PYT04718 | KP79_PYT09237 | A0A210PLR3 | A0A210PWI1 | WD repeat-containing protein 46. | Something about silencing protein 10. | 0.999 |
KP79_PYT04718 | KP79_PYT15363 | A0A210PLR3 | A0A210QZ54 | WD repeat-containing protein 46. | U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. | 0.994 |
KP79_PYT04718 | KP79_PYT17033 | A0A210PLR3 | A0A210R1U8 | WD repeat-containing protein 46. | Nucleolar protein 14. | 0.999 |
KP79_PYT04718 | KP79_PYT18160 | A0A210PLR3 | A0A210QPS7 | WD repeat-containing protein 46. | Protein AATF. | 0.994 |
KP79_PYT04718 | KP79_PYT18405 | A0A210PLR3 | A0A210PG45 | WD repeat-containing protein 46. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
KP79_PYT04718 | KP79_PYT18744 | A0A210PLR3 | A0A210Q3L6 | WD repeat-containing protein 46. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.998 |
KP79_PYT04718 | KP79_PYT23575 | A0A210PLR3 | A0A210PHJ3 | WD repeat-containing protein 46. | DDB1-and CUL4-associated factor 13. | 0.998 |
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