Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KP79_PYT00438 | KP79_PYT09447 | A0A210QXX1 | A0A210QNT0 | S-antigen protein. | 4-coumarate--CoA ligase 1. | 0.692 |
KP79_PYT00438 | KP79_PYT11014 | A0A210QXX1 | A0A210PZS4 | S-antigen protein. | Uncharacterized protein. | 0.999 |
KP79_PYT00438 | KP79_PYT21519 | A0A210QXX1 | A0A210PG24 | S-antigen protein. | Uncharacterized protein. | 0.980 |
KP79_PYT06732 | KP79_PYT08926 | A0A210QN86 | A0A210PR45 | Mediator of RNA polymerase II transcription subunit 14. | Mediator of RNA polymerase II transcription subunit 23. | 0.989 |
KP79_PYT06732 | KP79_PYT09447 | A0A210QN86 | A0A210QNT0 | Mediator of RNA polymerase II transcription subunit 14. | 4-coumarate--CoA ligase 1. | 0.722 |
KP79_PYT06732 | KP79_PYT09504 | A0A210QN86 | A0A210Q453 | Mediator of RNA polymerase II transcription subunit 14. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.998 |
KP79_PYT06732 | KP79_PYT19244 | A0A210QN86 | A0A210PSH3 | Mediator of RNA polymerase II transcription subunit 14. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.996 |
KP79_PYT06732 | MED15 | A0A210QN86 | A0A210QVJ1 | Mediator of RNA polymerase II transcription subunit 14. | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.991 |
KP79_PYT06732 | MED17 | A0A210QN86 | A0A210QEP6 | Mediator of RNA polymerase II transcription subunit 14. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.998 |
KP79_PYT08926 | KP79_PYT06732 | A0A210PR45 | A0A210QN86 | Mediator of RNA polymerase II transcription subunit 23. | Mediator of RNA polymerase II transcription subunit 14. | 0.989 |
KP79_PYT08926 | KP79_PYT09447 | A0A210PR45 | A0A210QNT0 | Mediator of RNA polymerase II transcription subunit 23. | 4-coumarate--CoA ligase 1. | 0.696 |
KP79_PYT08926 | KP79_PYT09504 | A0A210PR45 | A0A210Q453 | Mediator of RNA polymerase II transcription subunit 23. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.977 |
KP79_PYT08926 | KP79_PYT19244 | A0A210PR45 | A0A210PSH3 | Mediator of RNA polymerase II transcription subunit 23. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.993 |
KP79_PYT08926 | MED15 | A0A210PR45 | A0A210QVJ1 | Mediator of RNA polymerase II transcription subunit 23. | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.984 |
KP79_PYT08926 | MED17 | A0A210PR45 | A0A210QEP6 | Mediator of RNA polymerase II transcription subunit 23. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.976 |
KP79_PYT09447 | KP79_PYT00438 | A0A210QNT0 | A0A210QXX1 | 4-coumarate--CoA ligase 1. | S-antigen protein. | 0.692 |
KP79_PYT09447 | KP79_PYT06732 | A0A210QNT0 | A0A210QN86 | 4-coumarate--CoA ligase 1. | Mediator of RNA polymerase II transcription subunit 14. | 0.722 |
KP79_PYT09447 | KP79_PYT08926 | A0A210QNT0 | A0A210PR45 | 4-coumarate--CoA ligase 1. | Mediator of RNA polymerase II transcription subunit 23. | 0.696 |
KP79_PYT09447 | KP79_PYT09504 | A0A210QNT0 | A0A210Q453 | 4-coumarate--CoA ligase 1. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.683 |
KP79_PYT09447 | KP79_PYT11014 | A0A210QNT0 | A0A210PZS4 | 4-coumarate--CoA ligase 1. | Uncharacterized protein. | 0.769 |
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