STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT13814ATPase WRNIP1. (685 aa)    
Predicted Functional Partners:
KP79_PYT19025
Werner syndrome ATP-dependent helicase-like.
   
 
 0.837
KP79_PYT12062
E3 ubiquitin-protein ligase RAD18.
    
 
 0.784
KP79_PYT22799
ATP-dependent DNA helicase RecS.
   
 
 0.759
KP79_PYT00395
Werner syndrome ATP-dependent helicase.
   
 
 0.759
KP79_PYT25386
Werner syndrome ATP-dependent helicase.
   
 
 0.759
KP79_PYT12060
F-box only protein 18.
    
 
 0.719
KP79_PYT05198
DNA polymerase delta subunit 2.
    
 
 0.705
KP79_PYT23559
DNA replication ATP-dependent helicase/nuclease DNA2.
    
 
 0.607
KP79_PYT01817
Exonuclease 1.
  
  
 0.580
KP79_PYT05855
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 
 0.555
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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