STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT13263Transmembrane protein 184C. (577 aa)    
Predicted Functional Partners:
KP79_PYT17605
Uncharacterized protein.
      
 0.568
KP79_PYT06161
SUMO-conjugating enzyme UBC9-B; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.483
KP79_PYT00869
Acyl-CoA-binding domain-containing protein 6.
      
 0.476
KP79_PYT13575
Gamma-aminobutyric acid receptor-associated protein-like 2.
    
   0.467
KP79_PYT18070
Microtubule-associated proteins 1A/1B light chain 3B.
    
   0.467
KP79_PYT21057
Gamma-aminobutyric acid receptor-associated protein.
    
   0.467
KP79_PYT09863
Microtubule-associated proteins 1A/1B light chain 3C.
    
   0.467
KP79_PYT10238
Protein dpy-30-like.
    
   0.444
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.