STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT11694Universal stress protein YxiE. (146 aa)    
Predicted Functional Partners:
KP79_PYT22643
RNA polymerase-associated protein LEO1.
    
 0.840
KP79_PYT15646
Tetratricopeptide repeat protein 37.
    
 0.617
KP79_PYT04263
Helicase SKI2W.
    
 0.565
KP79_PYT03860
Parafibromin.
    
 0.547
KP79_PYT09358
RNA polymerase II-associated factor 1-like.
   
 0.525
KP79_PYT19618
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.458
KP79_PYT11848
ATP-dependent RNA helicase DDX20.
    
 0.427
KP79_PYT08212
HBS1-like protein.
    
 0.425
KP79_PYT09227
Superkiller viralicidic activity 2-like 2.
    
 0.411
KP79_PYT18047
DNA damage-binding protein 1.
    
 0.408
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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