STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT04791Ribonuclease 3. (1451 aa)    
Predicted Functional Partners:
KP79_PYT00138
Microprocessor complex subunit DGCR8.
   
 0.992
KP79_PYT24017
Protein argonaute-2; Belongs to the argonaute family.
    
 0.930
KP79_PYT19683
Interferon-inducible double stranded RNA-dependent protein kinase activator A-like A.
    
 0.894
KP79_PYT06821
28S ribosomal protein S9, mitochondrial.
   
 
 0.805
KP79_PYT23295
Double-stranded RNA-binding protein Staufen-like 2.
    
 0.799
KP79_PYT13426
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
 
 
    0.799
KP79_PYT16215
40S ribosomal protein S23.
  
 
 0.788
KP79_PYT07133
28S ribosomal protein S6, mitochondrial.
   
 
 0.785
KP79_PYT05437
39S ribosomal protein L27, mitochondrial.
  
 
 0.783
KP79_PYT07878
39S ribosomal protein L19, mitochondrial.
  
 
 0.776
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.