STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT18560Dynein light chain roadblock. (99 aa)    
Predicted Functional Partners:
KP79_PYT03922
Cytoplasmic dynein 1 intermediate chain 2.
   
 0.939
KP79_PYT06605
Dynein light chain Tctex-type 1.
   
 
 0.874
KP79_PYT04120
WD repeat-containing protein 60.
    
 0.832
KP79_PYT13426
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
    
 0.789
KP79_PYT17042
WD repeat-containing protein 34.
    
 0.786
KP79_PYT20762
Tctex1 domain-containing protein 2.
   
 0.719
KP79_PYT05058
Dynein light chain.
   
 0.658
KP79_PYT06980
Tctex1 domain-containing protein 1-A.
  
 
 0.656
KP79_PYT14763
Dynein intermediate chain 2, ciliary.
   
 0.654
KP79_PYT08758
Tctex1 domain-containing protein 1.
  
 
 0.653
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.