STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT21745Arginine-glutamic acid dipeptide repeats protein. (1542 aa)    
Predicted Functional Partners:
KP79_PYT10277
Protein unc-79-like.
      
 0.731
KP79_PYT14235
Sal-like protein 3.
   
 0.654
KP79_PYT14144
Protocadherin Fat 3.
    
 0.646
KP79_PYT23922
Protocadherin Fat 3.
    
 0.646
KP79_PYT06715
POU domain protein.
    
 
 0.583
KP79_PYT08074
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.567
KP79_PYT08179
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.567
KP79_PYT24858
Protein tailless.
    
 0.539
KP79_PYT07207
Nuclear receptor subfamily 2 group E member 1.
    
 0.539
KP79_PYT07206
Nuclear receptor subfamily 2 group E member 1.
    
 0.539
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.