STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT15890Sphingomyelin phosphodiesterase 4; Belongs to the peroxisomal membrane protein PXMP2/4 family. (198 aa)    
Predicted Functional Partners:
KP79_PYT22422
Peroxisomal biogenesis factor 19.
    
 0.800
KP79_PYT01018
Peroxisomal biogenesis factor 3.
   
 
 0.760
KP79_PYT17903
Peroxisomal membrane protein PEX16.
   
 
 0.694
KP79_PYT05972
Peroxisomal membrane protein PMP34; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 0.686
KP79_PYT08625
Peroxisomal membrane protein PEX13.
   
 
 0.678
KP79_PYT04134
Acyl-CoA-binding domain-containing protein 5.
     
 0.662
KP79_PYT08279
ATP-binding cassette sub-family D member 3.
    
 0.662
KP79_PYT11773
ATP-binding cassette sub-family D member 2.
     
 0.657
KP79_PYT21559
Peroxisomal membrane protein PEX14.
   
 
 0.648
KP79_PYT18435
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.644
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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