STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT12293Ubiquitin-conjugating enzyme E2-22 kDa; Belongs to the ubiquitin-conjugating enzyme family. (199 aa)    
Predicted Functional Partners:
KP79_PYT20483
E3 ubiquitin-protein ligase TRIP12.
   
 0.967
KP79_PYT03955
Ubiquitin-60S ribosomal protein L40.
   
 0.963
KP79_PYT11349
Ubiquitin-like modifier-activating enzyme 1.
   
 0.951
KP79_PYT14746
Ubiquitin-like modifier-activating enzyme 6.
   
 0.951
KP79_PYT09651
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.883
KP79_PYT06025
AN1-type zinc finger protein 4.
   
 0.883
KP79_PYT11216
Ubiquitin-like protein 4A-A.
   
 0.881
KP79_PYT11974
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
   
0.856
KP79_PYT06161
SUMO-conjugating enzyme UBC9-B; Belongs to the ubiquitin-conjugating enzyme family.
    
 
0.843
KP79_PYT10749
Protein FAM89B.
    
 0.820
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.