STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT04416Exosome complex component RRP4. (309 aa)    
Predicted Functional Partners:
KP79_PYT08525
Exosome complex component RRP40.
   
 0.999
KP79_PYT16930
Exosome complex component CSL4.
   
 0.999
KP79_PYT13835
Exosome complex component RRP41.
 
 
 0.999
KP79_PYT12328
Exosome complex component RRP45.
   
 0.999
KP79_PYT14515
Exosome complex component RRP42.
   
 0.999
KP79_PYT21106
Exosome component 10.
   
 0.998
KP79_PYT12738
Exosome complex component RRP43.
   
 0.998
KP79_PYT05772
Exosome complex component RRP46.
   
 0.998
KP79_PYT09227
Superkiller viralicidic activity 2-like 2.
   
 0.995
KP79_PYT23883
Exosome complex component MTR3.
   
 0.995
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.