STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT17940GTP-binding protein 6. (505 aa)    
Predicted Functional Partners:
KP79_PYT03933
39S ribosomal protein L32, mitochondrial.
    
 
 0.933
KP79_PYT23252
39S ribosomal protein L9, mitochondrial.
   
 
 0.910
KP79_PYT23786
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.909
KP79_PYT07878
39S ribosomal protein L19, mitochondrial.
   
 
 0.904
KP79_PYT05437
39S ribosomal protein L27, mitochondrial.
   
 
 0.896
KP79_PYT01960
39S ribosomal protein L21, mitochondrial.
   
   0.892
KP79_PYT18430
60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.888
KP79_PYT10414
39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.888
KP79_PYT13570
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
   0.883
KP79_PYT24430
Mitochondrial assembly of ribosomal large subunit protein 1.
   
 
 0.849
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.