STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT17023Actin-binding LIM protein 1. (481 aa)    
Predicted Functional Partners:
KP79_PYT17341
Alpha-adducin.
   
 0.728
KP79_PYT21148
Probable methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P).
   
 0.650
KP79_PYT09424
Protein enabled.
   
  
 0.554
KP79_PYT05878
Netrin-1.
    
 0.457
KP79_PYT03208
Uncharacterized protein.
  
 
 
 0.453
KP79_PYT00463
Neogenin.
     
 0.450
KP79_PYT22463
Roundabout-like 2.
   
  
 0.445
KP79_PYT07804
Uncharacterized protein.
      
 0.443
KP79_PYT10441
Synaptotagmin-C.
  
     0.440
KP79_PYT19469
Ras-associated and pleckstrin homology domains-containing protein 1.
      
 0.439
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.