STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT10469ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. (190 aa)    
Predicted Functional Partners:
KP79_PYT08938
Cyclin-G-associated kinase.
    
 0.922
KP79_PYT11816
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.709
KP79_PYT05594
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1.
    
 0.692
KP79_PYT06651
Intersectin-1.
    
 0.691
KP79_PYT21242
Intersectin-1.
    
 0.691
KP79_PYT12487
Intersectin-2.
    
 0.691
KP79_PYT14172
AP-1 complex subunit gamma.
    
 0.685
KP79_PYT16373
AP complex subunit beta.
   
 0.678
KP79_PYT25912
Leucine-rich repeat serine/threonine-protein kinase 1.
  
 0.654
KP79_PYT08829
Serine/threonine-protein kinase pats1.
  
 0.654
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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