STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT20982Agrin. (1357 aa)    
Predicted Functional Partners:
KP79_PYT11184
Dystroglycan.
   
 0.767
KP79_PYT10260
Nidogen-1.
   
 0.676
KP79_PYT03266
Low-density lipoprotein receptor-related protein 2.
    
 0.541
KP79_PYT24144
Low-density lipoprotein receptor-related protein 2.
    
 0.541
KP79_PYT08957
Very low-density lipoprotein receptor.
    
 0.541
KP79_PYT18129
Low-density lipoprotein receptor-related protein 4.
    
 0.541
KP79_PYT09300
Low-density lipoprotein receptor-related protein 8.
    
 0.541
KP79_PYT05235
Low-density lipoprotein receptor.
    
 0.541
KP79_PYT18156
Low-density lipoprotein receptor-related protein 6.
    
 0.541
KP79_PYT00740
Very low-density lipoprotein receptor.
    
 0.541
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.