STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT12214Transcriptional adapter 2-alpha. (420 aa)    
Predicted Functional Partners:
KP79_PYT18400
Transcriptional adapter 3-B.
    
 0.986
KP79_PYT10879
Histone acetyltransferase KAT2B.
   
 0.977
KP79_PYT16429
SAGA-associated factor 29-like.
    
 0.975
KP79_PYT02181
Transcription initiation factor TFIID subunit 9B.
    
 0.960
KP79_PYT01897
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.949
KP79_PYT19465
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.942
KP79_PYT07729
Transcription initiation protein SPT3-like.
    
 0.940
KP79_PYT06307
Ubiquitin carboxyl-terminal hydrolase.
    
 0.929
KP79_PYT14090
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
    
 0.917
KP79_PYT11174
Ataxin-7.
    
 0.907
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.