STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT03556Myeloid differentiation primary response protein MyD88. (462 aa)    
Predicted Functional Partners:
KP79_PYT20164
Lysine-specific demethylase 6A.
   
 0.929
KP79_PYT09158
Uncharacterized protein.
   
 0.803
KP79_PYT22643
RNA polymerase-associated protein LEO1.
   
 
 0.773
KP79_PYT20840
Interleukin-1 receptor-associated kinase 4.
   
 0.763
KP79_PYT05849
Histone H2A; Belongs to the histone H2A family.
   
 0.762
KP79_PYT16023
Lysine-specific demethylase 2B.
    
 0.754
KP79_PYT05501
Core histone macro-H2A.1; Belongs to the histone H2A family.
   
 0.750
KP79_PYT24367
Histone-lysine N-methyltransferase SETD2.
   
 0.729
KP79_PYT15698
Histone-lysine N-methyltransferase SETD1B-A.
   
 0.729
KP79_PYT10879
Histone acetyltransferase KAT2B.
    
 0.728
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.