STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT09579Multiple coagulation factor deficiency protein 2-like. (270 aa)    
Predicted Functional Partners:
KP79_PYT01133
Protein ERGIC-53.
   
 0.992
KP79_PYT18792
Lactadherin.
     
 0.755
KP79_PYT22898
Calmodulin-like protein 4.
      
 0.662
KP79_PYT06155
Protein transport protein Sec31A.
     
 0.658
KP79_PYT17766
Vesicular integral-membrane protein VIP36.
     
 0.653
KP79_PYT00749
Dipeptidyl peptidase 1; Belongs to the peptidase C1 family.
     
 0.630
KP79_PYT04077
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
   
 
 0.628
KP79_PYT18937
Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.625
KP79_PYT10391
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 
 0.612
KP79_PYT05934
Protein transport protein Sec24C.
     
 0.606
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.