STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT08261Xylose isomerase. (460 aa)    
Predicted Functional Partners:
KP79_PYT16907
Xylulose kinase.
  
 
 0.996
KP79_PYT22215
Sorbitol dehydrogenase.
     
 0.920
KP79_PYT15677
Sorbitol dehydrogenase.
     
 0.920
KP79_PYT15678
Sorbitol dehydrogenase.
     
 0.920
KP79_PYT06727
Sorbitol dehydrogenase.
     
 0.920
KP79_PYT16986
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase.
    
 0.919
KP79_PYT16921
Phosphotransferase.
     
 0.909
KP79_PYT17094
Phosphotransferase.
     
 0.909
KP79_PYT07633
Phosphotransferase.
     
 0.909
KP79_PYT15693
Ketohexokinase.
     
  0.900
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.