STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT08270Nucleoporin NDC1. (572 aa)    
Predicted Functional Partners:
KP79_PYT11014
Uncharacterized protein.
   
 0.986
KP79_PYT14137
Nuclear pore protein.
   
 0.983
KP79_PYT21519
Uncharacterized protein.
   
 0.979
KP79_PYT00438
S-antigen protein.
   
 0.979
KP79_PYT08549
Nuclear pore complex protein Nup155.
   
 0.977
KP79_PYT00225
Nucleoporin 205.
   
 0.971
KP79_PYT19875
Aladin.
   
 0.966
KP79_PYT03707
Nucleoporin NUP188-like protein.
    
 0.959
KP79_PYT13430
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
   
 0.956
KP79_PYT12771
RANBP2-like and GRIP domain-containing protein 8.
   
 0.954
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.