Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KP79_PYT04662 | KP79_PYT05857 | A0A210QIW9 | A0A210QV73 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.901 |
KP79_PYT04662 | KP79_PYT08513 | A0A210QIW9 | A0A210PEA5 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | L-threonine dehydratase catabolic TdcB. | 0.943 |
KP79_PYT04662 | KP79_PYT16039 | A0A210QIW9 | A0A210R751 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | L-serine dehydratase/L-threonine deaminase. | 0.940 |
KP79_PYT04662 | KP79_PYT16094 | A0A210QIW9 | A0A210QNH5 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine racemase. | 0.938 |
KP79_PYT04662 | KP79_PYT21211 | A0A210QIW9 | A0A210QD96 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine--pyruvate aminotransferase. | 0.971 |
KP79_PYT04662 | KP79_PYT22331 | A0A210QIW9 | A0A210Q7U8 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.946 |
KP79_PYT05857 | KP79_PYT04662 | A0A210QV73 | A0A210QIW9 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.901 |
KP79_PYT05857 | KP79_PYT08513 | A0A210QV73 | A0A210PEA5 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | L-threonine dehydratase catabolic TdcB. | 0.943 |
KP79_PYT05857 | KP79_PYT16039 | A0A210QV73 | A0A210R751 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | L-serine dehydratase/L-threonine deaminase. | 0.940 |
KP79_PYT05857 | KP79_PYT16094 | A0A210QV73 | A0A210QNH5 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine racemase. | 0.938 |
KP79_PYT05857 | KP79_PYT21211 | A0A210QV73 | A0A210QD96 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine--pyruvate aminotransferase. | 0.971 |
KP79_PYT05857 | KP79_PYT22331 | A0A210QV73 | A0A210Q7U8 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.946 |
KP79_PYT08038 | KP79_PYT08513 | A0A210PGA8 | A0A210PEA5 | Cystathionine gamma-lyase. | L-threonine dehydratase catabolic TdcB. | 0.865 |
KP79_PYT08038 | KP79_PYT16039 | A0A210PGA8 | A0A210R751 | Cystathionine gamma-lyase. | L-serine dehydratase/L-threonine deaminase. | 0.865 |
KP79_PYT08038 | KP79_PYT18805 | A0A210PGA8 | A0A210Q3C8 | Cystathionine gamma-lyase. | Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. | 0.930 |
KP79_PYT08038 | KP79_PYT18900 | A0A210PGA8 | A0A210QZH5 | Cystathionine gamma-lyase. | Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. | 0.930 |
KP79_PYT08038 | KP79_PYT22331 | A0A210PGA8 | A0A210Q7U8 | Cystathionine gamma-lyase. | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.998 |
KP79_PYT08513 | KP79_PYT04662 | A0A210PEA5 | A0A210QIW9 | L-threonine dehydratase catabolic TdcB. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.943 |
KP79_PYT08513 | KP79_PYT05857 | A0A210PEA5 | A0A210QV73 | L-threonine dehydratase catabolic TdcB. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.943 |
KP79_PYT08513 | KP79_PYT08038 | A0A210PEA5 | A0A210PGA8 | L-threonine dehydratase catabolic TdcB. | Cystathionine gamma-lyase. | 0.865 |
page 1 of 4