STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CK5_06130Predicted transcriptional regulators. (187 aa)    
Predicted Functional Partners:
CK5_02650
LysM domain.
  
    0.727
CK5_21990
Subtilase family.
  
     0.720
CK5_20460
Stage V sporulation protein AA.
  
     0.712
CK5_06760
Stage III sporulation protein AE (spore_III_AE).
  
     0.686
CK5_12990
Hypothetical protein.
  
     0.684
CK5_16190
Subtilisin-like serine proteases.
  
     0.674
CK5_20260
Hypothetical protein.
  
     0.670
ssb_3
Single-stranded DNA-binding protein.
  
     0.667
CK5_06780
Hypothetical protein.
  
   
 0.663
CK5_20340
Small, acid-soluble spore proteins, alpha/beta type.
  
     0.605
Your Current Organism:
Blautia obeum
NCBI taxonomy Id: 657314
Other names: B. obeum A2-162, Blautia obeum A2-162, Ruminococcus obeum A2-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.