STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CK5_10810Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (206 aa)    
Predicted Functional Partners:
CK5_10820
Signal transduction histidine kinase.
 
 
 0.968
luxQ_2
Bacterial extracellular solute-binding proteins, family 3.
  
 
 0.856
CK5_10850
ABC-type multidrug transport system, permease component.
 
  
 0.807
CK5_10830
ABC-type multidrug transport system, ATPase component.
 
    0.778
CK5_10840
ABC-2 type transporter.
 
  
 0.772
CK5_23070
FOG: EAL domain.
 
  
 0.622
rpfC_1
Signal transduction histidine kinase.
  
 
 0.450
CK5_07740
Signal transduction histidine kinase.
  
 
 0.450
CK5_27340
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
 
 0.450
CK5_12550
Signal transduction histidine kinase.
  
 
 0.412
Your Current Organism:
Blautia obeum
NCBI taxonomy Id: 657314
Other names: B. obeum A2-162, Blautia obeum A2-162, Ruminococcus obeum A2-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.