STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgB_1Alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (628 aa)    
Predicted Functional Partners:
glgA1_1
Glycogen/starch synthases, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 0.988
CK5_29730
Type II secretory pathway, pullulanase PulA and related glycosidases.
 
 
 0.978
malP_2
Glycogen/starch/alpha-glucan phosphorylases; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.965
CK5_22350
Glycogen/starch/alpha-glucan phosphorylases.
  
 0.965
CK5_33090
Type II secretory pathway, pullulanase PulA and related glycosidases.
 
 
0.964
CK5_07300
Glycosidases.
 
 
 0.940
CK5_02910
4-alpha-glucanotransferase.
  
 
 0.927
CK5_34380
4-alpha-glucanotransferase.
  
 
 0.927
CK5_23620
Alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase.
  
  
 
0.909
CK5_34470
Alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase.
  
  
 
0.909
Your Current Organism:
Blautia obeum
NCBI taxonomy Id: 657314
Other names: B. obeum A2-162, Blautia obeum A2-162, Ruminococcus obeum A2-162
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