STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CK5_13770Trk-type K+ transport systems, membrane components. (445 aa)    
Predicted Functional Partners:
ktrA_1
K+ transport systems, NAD-binding component.
 
 
 0.995
porA
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
   
 
 0.809
trkA
K+ transport systems, NAD-binding component.
  
 
 0.805
kdpD
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
     
 0.772
kdpE
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.721
CK5_13760
Hypothetical protein.
       0.417
Your Current Organism:
Blautia obeum
NCBI taxonomy Id: 657314
Other names: B. obeum A2-162, Blautia obeum A2-162, Ruminococcus obeum A2-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.