Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CK5_11510 | CK5_14220 | CK5_11510 | CK5_14220 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase. | Peroxiredoxin. | 0.431 |
CK5_11510 | dfa1 | CK5_11510 | CK5_32250 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase. | Uncharacterized flavoproteins. | 0.408 |
CK5_14200 | CK5_14210 | CK5_14200 | CK5_14210 | Hypothetical protein. | Hypothetical protein. | 0.482 |
CK5_14200 | CK5_14220 | CK5_14200 | CK5_14220 | Hypothetical protein. | Peroxiredoxin. | 0.482 |
CK5_14200 | yaaA_1 | CK5_14200 | CK5_14230 | Hypothetical protein. | Uncharacterized protein conserved in bacteria; Belongs to the UPF0246 family. | 0.482 |
CK5_14210 | CK5_14200 | CK5_14210 | CK5_14200 | Hypothetical protein. | Hypothetical protein. | 0.482 |
CK5_14210 | CK5_14220 | CK5_14210 | CK5_14220 | Hypothetical protein. | Peroxiredoxin. | 0.780 |
CK5_14210 | yaaA_1 | CK5_14210 | CK5_14230 | Hypothetical protein. | Uncharacterized protein conserved in bacteria; Belongs to the UPF0246 family. | 0.780 |
CK5_14220 | CK5_11510 | CK5_14220 | CK5_11510 | Peroxiredoxin. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase. | 0.431 |
CK5_14220 | CK5_14200 | CK5_14220 | CK5_14200 | Peroxiredoxin. | Hypothetical protein. | 0.482 |
CK5_14220 | CK5_14210 | CK5_14220 | CK5_14210 | Peroxiredoxin. | Hypothetical protein. | 0.780 |
CK5_14220 | dfa1 | CK5_14220 | CK5_32250 | Peroxiredoxin. | Uncharacterized flavoproteins. | 0.586 |
CK5_14220 | porA | CK5_14220 | CK5_30850 | Peroxiredoxin. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. | 0.422 |
CK5_14220 | yaaA_1 | CK5_14220 | CK5_14230 | Peroxiredoxin. | Uncharacterized protein conserved in bacteria; Belongs to the UPF0246 family. | 0.817 |
dfa1 | CK5_11510 | CK5_32250 | CK5_11510 | Uncharacterized flavoproteins. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase. | 0.408 |
dfa1 | CK5_14220 | CK5_32250 | CK5_14220 | Uncharacterized flavoproteins. | Peroxiredoxin. | 0.586 |
dfa1 | porA | CK5_32250 | CK5_30850 | Uncharacterized flavoproteins. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. | 0.834 |
porA | CK5_14220 | CK5_30850 | CK5_14220 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. | Peroxiredoxin. | 0.422 |
porA | dfa1 | CK5_30850 | CK5_32250 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. | Uncharacterized flavoproteins. | 0.834 |
yaaA_1 | CK5_14200 | CK5_14230 | CK5_14200 | Uncharacterized protein conserved in bacteria; Belongs to the UPF0246 family. | Hypothetical protein. | 0.482 |
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