STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CK5_19560Biotin synthase. (328 aa)    
Predicted Functional Partners:
CK5_01860
birA, biotin-[acetyl-CoA-carboxylase] ligase region.
  
 
 0.943
CK5_35080
birA, biotin-[acetyl-CoA-carboxylase] ligase region.
  
 
 0.943
CK5_30510
Iron-only hydrogenase maturation protein HydE.
  
  
 
0.905
CK5_19550
Uncharacterized conserved protein.
  
  
 0.777
CK5_17300
Hydroxymethylpyrimidine synthase.
 
  
 0.544
CK5_02840
Tyrosine lyase ThiH.
 
  
 0.449
nqo1_1
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit.
  
  
 0.432
CK5_17170
Iron-only hydrogenase maturation protein HydF.
     
 0.423
CK5_19580
Hypothetical protein.
       0.422
Your Current Organism:
Blautia obeum
NCBI taxonomy Id: 657314
Other names: B. obeum A2-162, Blautia obeum A2-162, Ruminococcus obeum A2-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.