STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CK5_22840ABC-type Fe3+-siderophore transport system, permease component. (342 aa)    
Predicted Functional Partners:
CK5_22830
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
 
 
 0.994
CK5_22850
ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 
 0.974
CK5_06620
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
 
 
 0.964
CK5_16600
Hypothetical protein.
  
 
 0.883
CK5_22810
Predicted nucleotide kinase.
 
     0.808
CK5_22820
Methylase involved in ubiquinone/menaquinone biosynthesis.
 
     0.797
CK5_06600
ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 
 0.718
CK5_06570
Hypothetical protein.
  
 
 0.661
CK5_06590
Hypothetical protein.
  
 
 0.641
CK5_24130
Hypothetical protein.
  
 
 0.641
Your Current Organism:
Blautia obeum
NCBI taxonomy Id: 657314
Other names: B. obeum A2-162, Blautia obeum A2-162, Ruminococcus obeum A2-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.