STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemLGlutamate-1-semialdehyde 2,1-aminomutase. (425 aa)    
Predicted Functional Partners:
hemB
Porphobilinogen synthase; Belongs to the ALAD family.
 
 
 0.998
CK5_24600
glutamyl-tRNA reductase.
 
 0.997
CK5_24620
Hydroxymethylbilane synthase.
 
  
 0.980
CK5_24630
uroporphyrinogen-III synthase.
 
  
 0.970
CK5_24610
Siroheme synthase, N-terminal domain.
 
   
 0.900
tycA
Non-ribosomal peptide synthetase modules and related proteins; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.856
CK5_17320
Thiamine-phosphate diphosphorylase.
    
 0.632
CK5_00720
Malonyl CoA-acyl carrier protein transacylase.
    
 0.519
CK5_11510
Diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase.
     
 0.499
CK5_24660
3-carboxymuconate cyclase.
       0.493
Your Current Organism:
Blautia obeum
NCBI taxonomy Id: 657314
Other names: B. obeum A2-162, Blautia obeum A2-162, Ruminococcus obeum A2-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.