Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CK5_14180 | CK5_16750 | CK5_14180 | CK5_16750 | Malic enzyme. | Malic enzyme. | 0.901 |
CK5_14180 | fumB | CK5_14180 | CK5_28500 | Malic enzyme. | Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region. | 0.951 |
CK5_14180 | gltA | CK5_14180 | CK5_18980 | Malic enzyme. | Citrate synthase; Belongs to the citrate synthase family. | 0.838 |
CK5_14180 | porA | CK5_14180 | CK5_30850 | Malic enzyme. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. | 0.968 |
CK5_14180 | prpC_1 | CK5_14180 | CK5_23290 | Malic enzyme. | Citrate synthase; Belongs to the citrate synthase family. | 0.838 |
CK5_14180 | ttdA_2 | CK5_14180 | CK5_28510 | Malic enzyme. | Fumarase alpha subunit. | 0.926 |
CK5_16750 | CK5_14180 | CK5_16750 | CK5_14180 | Malic enzyme. | Malic enzyme. | 0.901 |
CK5_16750 | fumB | CK5_16750 | CK5_28500 | Malic enzyme. | Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region. | 0.952 |
CK5_16750 | gltA | CK5_16750 | CK5_18980 | Malic enzyme. | Citrate synthase; Belongs to the citrate synthase family. | 0.838 |
CK5_16750 | porA | CK5_16750 | CK5_30850 | Malic enzyme. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. | 0.968 |
CK5_16750 | prpC_1 | CK5_16750 | CK5_23290 | Malic enzyme. | Citrate synthase; Belongs to the citrate synthase family. | 0.838 |
CK5_16750 | ttdA_2 | CK5_16750 | CK5_28510 | Malic enzyme. | Fumarase alpha subunit. | 0.926 |
CK5_23280 | aspC | CK5_23280 | CK5_15300 | Aspartate/tyrosine/aromatic aminotransferase. | Aspartate/tyrosine/aromatic aminotransferase. | 0.900 |
CK5_23280 | fumB | CK5_23280 | CK5_28500 | Aspartate/tyrosine/aromatic aminotransferase. | Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region. | 0.800 |
CK5_23280 | porA | CK5_23280 | CK5_30850 | Aspartate/tyrosine/aromatic aminotransferase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. | 0.595 |
CK5_23280 | prpC_1 | CK5_23280 | CK5_23290 | Aspartate/tyrosine/aromatic aminotransferase. | Citrate synthase; Belongs to the citrate synthase family. | 0.623 |
CK5_23280 | ttdA_2 | CK5_23280 | CK5_28510 | Aspartate/tyrosine/aromatic aminotransferase. | Fumarase alpha subunit. | 0.800 |
CK5_24510 | fumB | CK5_24510 | CK5_28500 | Succinate dehydrogenase/fumarate reductase, flavoprotein subunit. | Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region. | 0.790 |
CK5_24510 | gltA | CK5_24510 | CK5_18980 | Succinate dehydrogenase/fumarate reductase, flavoprotein subunit. | Citrate synthase; Belongs to the citrate synthase family. | 0.736 |
CK5_24510 | porA | CK5_24510 | CK5_30850 | Succinate dehydrogenase/fumarate reductase, flavoprotein subunit. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. | 0.999 |
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