STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssnAPutative selenium metabolism protein SsnA. (443 aa)    
Predicted Functional Partners:
CK5_30740
Hypothetical protein.
 
    0.928
mop_1
Selenium-dependent molybdenum hydroxylase 1.
 
  
 0.899
dapE
M20/DapE family protein YgeY/putative selenium metabolism hydrolase.
 
  
 0.790
ygeW
Probable carbamoyltransferase YgeW; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
 
    0.782
CK5_30700
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs.
 
    0.720
dpaL
Diaminopropionate ammonia-lyase.
 
  
 0.716
CK5_30520
Dihydropyrimidinase.
 
  
 0.703
hcrA_1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
  
 0.684
CK5_30530
Uncharacterized protein conserved in bacteria.
 
     0.665
CK5_30680
Selenium-dependent molybdenum hydroxylase system protein, YqeB family.
 
     0.633
Your Current Organism:
Blautia obeum
NCBI taxonomy Id: 657314
Other names: B. obeum A2-162, Blautia obeum A2-162, Ruminococcus obeum A2-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.