STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CK5_32080Hypothetical protein. (685 aa)    
Predicted Functional Partners:
CK5_11730
Predicted permease.
  
     0.734
CK5_32120
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.706
CK5_10480
ABC-type transport system, involved in lipoprotein release, permease component.
  
     0.672
CK5_06570
Hypothetical protein.
  
     0.638
CK5_14060
Acetyltransferases.
  
     0.578
CK5_24130
Hypothetical protein.
  
     0.529
relA_1
Guanosine polyphosphate pyrophosphohydrolases/synthetases.
  
     0.518
CK5_03880
Hypothetical protein.
  
     0.496
CK5_03970
Hypothetical protein.
  
     0.483
CK5_17490
Putative GTPases (G3E family).
  
     0.481
Your Current Organism:
Blautia obeum
NCBI taxonomy Id: 657314
Other names: B. obeum A2-162, Blautia obeum A2-162, Ruminococcus obeum A2-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.