STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arcAResponse regulator of the LytR/AlgR family. (235 aa)    
Predicted Functional Partners:
CK5_32120
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
  
 0.938
CK5_33010
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain.
 
 
 0.748
CK5_22330
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain.
 
 
 0.718
CK5_18730
Predicted signal transduction protein with a C-terminal ATPase domain.
 
 
 0.695
CK5_16980
Putative regulator of cell autolysis.
  
    0.619
CK5_00630
Predicted signal transduction protein with a C-terminal ATPase domain.
  
    0.615
CK5_32880
Predicted signal transduction protein with a C-terminal ATPase domain.
  
    0.609
CK5_15690
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
   
 0.576
CK5_13450
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain.
  
    0.562
CK5_18650
Predicted signal transduction protein with a C-terminal ATPase domain.
  
    0.484
Your Current Organism:
Blautia obeum
NCBI taxonomy Id: 657314
Other names: B. obeum A2-162, Blautia obeum A2-162, Ruminococcus obeum A2-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.