STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CK5_34600Signal transduction histidine kinase. (443 aa)    
Predicted Functional Partners:
phoP_3
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  0.995
CK5_03780
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
  0.941
barA_2
FOG: CheY-like receiver.
 
 
   0.907
yycF_3
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
   0.765
CK5_04020
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
   0.753
CK5_20890
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
   0.747
srrA_1
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
   0.738
yycF_2
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
   0.730
CK5_11820
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
   0.723
CK5_06440
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
   0.721
Your Current Organism:
Blautia obeum
NCBI taxonomy Id: 657314
Other names: B. obeum A2-162, Blautia obeum A2-162, Ruminococcus obeum A2-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.