Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RBR_02120 | RBR_11360 | Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O; Belongs to the HCP family. | Rubrerythrin. | 0.403 |
RBR_11360 | RBR_02120 | Rubrerythrin. | Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O; Belongs to the HCP family. | 0.403 |
RBR_11360 | RBR_21480 | Rubrerythrin. | Fe2+/Zn2+ uptake regulation proteins. | 0.540 |
RBR_11360 | RBR_21500 | Rubrerythrin. | Rubredoxin. | 0.591 |
RBR_21480 | RBR_11360 | Fe2+/Zn2+ uptake regulation proteins. | Rubrerythrin. | 0.540 |
RBR_21480 | RBR_21500 | Fe2+/Zn2+ uptake regulation proteins. | Rubredoxin. | 0.700 |
RBR_21500 | RBR_11360 | Rubredoxin. | Rubrerythrin. | 0.591 |
RBR_21500 | RBR_21480 | Rubredoxin. | Fe2+/Zn2+ uptake regulation proteins. | 0.700 |