node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RBR_01600 | RBR_15230 | RBR_01600 | RBR_15230 | Malonyl CoA-acyl carrier protein transacylase. | Phosphate:acyl-[acyl carrier protein] acyltransferase. | 0.894 |
RBR_01600 | rnc | RBR_01600 | RBR_15240 | Malonyl CoA-acyl carrier protein transacylase. | RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.519 |
RBR_01600 | rplF | RBR_01600 | RBR_08130 | Malonyl CoA-acyl carrier protein transacylase. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.531 |
RBR_01600 | rpmF | RBR_01600 | RBR_19720 | Malonyl CoA-acyl carrier protein transacylase. | LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family. | 0.541 |
RBR_01600 | rpsH | RBR_01600 | RBR_08120 | Malonyl CoA-acyl carrier protein transacylase. | SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.461 |
RBR_01600 | rpsM | RBR_01600 | RBR_08240 | Malonyl CoA-acyl carrier protein transacylase. | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.603 |
RBR_15230 | RBR_01600 | RBR_15230 | RBR_01600 | Phosphate:acyl-[acyl carrier protein] acyltransferase. | Malonyl CoA-acyl carrier protein transacylase. | 0.894 |
RBR_15230 | RBR_19690 | RBR_15230 | RBR_19690 | Phosphate:acyl-[acyl carrier protein] acyltransferase. | Conserved hypothetical integral membrane protein TIGR00023. | 0.993 |
RBR_15230 | rnc | RBR_15230 | RBR_15240 | Phosphate:acyl-[acyl carrier protein] acyltransferase. | RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.863 |
RBR_15230 | rplF | RBR_15230 | RBR_08130 | Phosphate:acyl-[acyl carrier protein] acyltransferase. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.757 |
RBR_15230 | rplT | RBR_15230 | RBR_15180 | Phosphate:acyl-[acyl carrier protein] acyltransferase. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.788 |
RBR_15230 | rpmF | RBR_15230 | RBR_19720 | Phosphate:acyl-[acyl carrier protein] acyltransferase. | LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family. | 0.849 |
RBR_15230 | rpsH | RBR_15230 | RBR_08120 | Phosphate:acyl-[acyl carrier protein] acyltransferase. | SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.758 |
RBR_15230 | rpsM | RBR_15230 | RBR_08240 | Phosphate:acyl-[acyl carrier protein] acyltransferase. | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.764 |
RBR_15230 | topA | RBR_15230 | RBR_15210 | Phosphate:acyl-[acyl carrier protein] acyltransferase. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.843 |
RBR_15230 | trmFO | RBR_15230 | RBR_15220 | Phosphate:acyl-[acyl carrier protein] acyltransferase. | tRNA:m(5)U-54 methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | 0.821 |
RBR_19690 | RBR_15230 | RBR_19690 | RBR_15230 | Conserved hypothetical integral membrane protein TIGR00023. | Phosphate:acyl-[acyl carrier protein] acyltransferase. | 0.993 |
RBR_19690 | topA | RBR_19690 | RBR_15210 | Conserved hypothetical integral membrane protein TIGR00023. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.588 |
rnc | RBR_01600 | RBR_15240 | RBR_01600 | RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Malonyl CoA-acyl carrier protein transacylase. | 0.519 |
rnc | RBR_15230 | RBR_15240 | RBR_15230 | RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Phosphate:acyl-[acyl carrier protein] acyltransferase. | 0.863 |