STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBR_17140Hypothetical protein. (111 aa)    
Predicted Functional Partners:
RBR_13330
Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
    
 0.813
RBR_02650
Phage/plasmid primase, P4 family, C-terminal domain.
    
 0.800
RBR_14630
Primosomal protein N'.
    
 0.799
RBR_17150
Hypothetical protein.
       0.773
RBR_17160
Hypothetical protein.
       0.773
RBR_17170
Antirestriction protein (ArdA).
       0.737
RBR_13500
DNA primase, catalytic core.
    
 0.723
RBR_17230
Hypothetical protein.
    
 0.693
RBR_17700
DNA replication protein.
  
 
 0.686
RBR_20850
Phage DNA replication protein (predicted replicative helicase loader).
  
 
 0.686
Your Current Organism:
Ruminococcus bromii
NCBI taxonomy Id: 657321
Other names: R. bromii L2-63, Ruminococcus bromii L2-63, Ruminococcus bromii str. L2-63, Ruminococcus bromii strain L2-63
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