Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RBR_00520 | RBR_17230 | Hypothetical protein. | Hypothetical protein. | 0.771 |
RBR_00520 | RBR_17280 | Hypothetical protein. | Bacterial mobilisation protein (MobC). | 0.782 |
RBR_00520 | RBR_17290 | Hypothetical protein. | Relaxase/Mobilisation nuclease domain. | 0.772 |
RBR_00520 | RBR_17300 | Hypothetical protein. | Hypothetical protein. | 0.782 |
RBR_00520 | RBR_17310 | Hypothetical protein. | Hypothetical protein. | 0.781 |
RBR_00520 | RBR_17320 | Hypothetical protein. | Hypothetical protein. | 0.786 |
RBR_00520 | RBR_17330 | Hypothetical protein. | Type IV secretory pathway, VirD4 components. | 0.718 |
RBR_00520 | RBR_17400 | Hypothetical protein. | Domain of unknown function DUF87. | 0.762 |
RBR_00520 | RBR_17420 | Hypothetical protein. | Uncharacterized protein conserved in bacteria. | 0.767 |
RBR_17230 | RBR_00520 | Hypothetical protein. | Hypothetical protein. | 0.771 |
RBR_17230 | RBR_17280 | Hypothetical protein. | Bacterial mobilisation protein (MobC). | 0.780 |
RBR_17230 | RBR_17290 | Hypothetical protein. | Relaxase/Mobilisation nuclease domain. | 0.903 |
RBR_17230 | RBR_17300 | Hypothetical protein. | Hypothetical protein. | 0.776 |
RBR_17230 | RBR_17310 | Hypothetical protein. | Hypothetical protein. | 0.769 |
RBR_17230 | RBR_17320 | Hypothetical protein. | Hypothetical protein. | 0.746 |
RBR_17230 | RBR_17330 | Hypothetical protein. | Type IV secretory pathway, VirD4 components. | 0.718 |
RBR_17230 | RBR_17340 | Hypothetical protein. | Hypothetical protein. | 0.774 |
RBR_17230 | RBR_17400 | Hypothetical protein. | Domain of unknown function DUF87. | 0.752 |
RBR_17230 | RBR_17420 | Hypothetical protein. | Uncharacterized protein conserved in bacteria. | 0.704 |
RBR_17280 | RBR_00520 | Bacterial mobilisation protein (MobC). | Hypothetical protein. | 0.782 |
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