Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RBR_20370 | RBR_20380 | RBR_20370 | RBR_20380 | Hypothetical protein. | Hypothetical protein. | 0.615 |
RBR_20370 | RBR_20390 | RBR_20370 | RBR_20390 | Hypothetical protein. | Membrane-associated phospholipid phosphatase. | 0.618 |
RBR_20370 | RBR_20410 | RBR_20370 | RBR_20410 | Hypothetical protein. | Acetyltransferase (isoleucine patch superfamily). | 0.568 |
RBR_20370 | hflX | RBR_20370 | RBR_20400 | Hypothetical protein. | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.478 |
RBR_20380 | RBR_20370 | RBR_20380 | RBR_20370 | Hypothetical protein. | Hypothetical protein. | 0.615 |
RBR_20380 | RBR_20390 | RBR_20380 | RBR_20390 | Hypothetical protein. | Membrane-associated phospholipid phosphatase. | 0.773 |
RBR_20380 | RBR_20410 | RBR_20380 | RBR_20410 | Hypothetical protein. | Acetyltransferase (isoleucine patch superfamily). | 0.549 |
RBR_20380 | hflX | RBR_20380 | RBR_20400 | Hypothetical protein. | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.578 |
RBR_20390 | RBR_20370 | RBR_20390 | RBR_20370 | Membrane-associated phospholipid phosphatase. | Hypothetical protein. | 0.618 |
RBR_20390 | RBR_20380 | RBR_20390 | RBR_20380 | Membrane-associated phospholipid phosphatase. | Hypothetical protein. | 0.773 |
RBR_20390 | RBR_20410 | RBR_20390 | RBR_20410 | Membrane-associated phospholipid phosphatase. | Acetyltransferase (isoleucine patch superfamily). | 0.558 |
RBR_20390 | hflX | RBR_20390 | RBR_20400 | Membrane-associated phospholipid phosphatase. | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.578 |
RBR_20410 | RBR_20370 | RBR_20410 | RBR_20370 | Acetyltransferase (isoleucine patch superfamily). | Hypothetical protein. | 0.568 |
RBR_20410 | RBR_20380 | RBR_20410 | RBR_20380 | Acetyltransferase (isoleucine patch superfamily). | Hypothetical protein. | 0.549 |
RBR_20410 | RBR_20390 | RBR_20410 | RBR_20390 | Acetyltransferase (isoleucine patch superfamily). | Membrane-associated phospholipid phosphatase. | 0.558 |
RBR_20410 | hflX | RBR_20410 | RBR_20400 | Acetyltransferase (isoleucine patch superfamily). | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.732 |
hflX | RBR_20370 | RBR_20400 | RBR_20370 | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | Hypothetical protein. | 0.478 |
hflX | RBR_20380 | RBR_20400 | RBR_20380 | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | Hypothetical protein. | 0.578 |
hflX | RBR_20390 | RBR_20400 | RBR_20390 | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | Membrane-associated phospholipid phosphatase. | 0.578 |
hflX | RBR_20410 | RBR_20400 | RBR_20410 | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | Acetyltransferase (isoleucine patch superfamily). | 0.732 |